Enantiomer-Dependent Biological Activity of Cysteine-Coated Ceria Nanoparticles in Colorectal Cancer Cells" Emre, E. S. T., Dinç, A., Esmkhani, S., Knittle, B., Sorensen, N., Yilmaz, A. M., Yazici, H., Yazici, H., & Kotov, N. A. (2026). (s. 2026.04.27.721174). bioRxiv. https://doi.org/10.64898/2026.04.27.721174

Automated Screening of Antibacterial Nanoparticle Literature: Dataset Curation and Model Evaluation”, Özturk, A., Özateş, Ş. B., Root, S. B., Violi, A., Kotov, N., VanEpps, J. S., & Emre, E. S. T. (2026)., Proceedings of the 19th Conference of the European Chapter of the Association for Computational Linguistics (Volume 1: Long Papers) (ss. 454-465). Association for Computational Linguistics. https://doi.org/10.18653/v1/2026.eacl-long.20

“Multiscale Chiral Zeroes of Biomolecules” Moudgal, N*, Ma,J*,Turalı-Emre, ES*,Kotov, NA - Communications Chemistry, 2025 doi.org/10.1038/s42004-025-01808-4

“Penicillamine-based chiral ZnO nanoparticles: A dual mechanism for infected wound healing via antibacterial activity and immune regulation” Chemical Engineering Journal, 524 (2025), 169284 Yao, H, Fan, Y, Turalı-Emre, ES*, Wang, J, Wang, X, Wei, 10.1016/j.cej.2025.169284

“L-arginine Modified Mesoporous Bioactive Glass with ROS scavenging and NO release for Periodontitis Treatment” Bioactive Materials, 48, (2025) Yao, H, Turalı-Emre, ES, Fan, Y, Wang, J, Liu, F, Wei, J 10.1016/j.bioactmat.2025.02.015

“Autocatalytic Nucleation and Self-Assembly of Inorganic Nanoparticles into Complex Biosimilar Networks” Angewandte Chemie-Internatıonal Edition (2025) McGlothin, CN, Whisnant, KG, Turalı-Emre, ES, Owuor, D, Lu,J, Xiao, X, Vecchio,D, VanEpps, S, Bogdan, P, Kotov, NA 10.1002/anie.202413444

“Chiroptical detection and mutation analysis of cancer-associated extracellular vesicles in microfluidic devices” Matter (2024) Kang, YT*, Kim, JY*, Turalı-Emre, ES, Jang, HJ, Cha, M, Kumari, A, Palacios-Rolston, C, Subramanian, C, Purcell, E, Owen, S, Lim, CM, Reddy, R, Jolly, S, Ramnath, N, Nagrath, S, Kotov, NA. 10.1016/j.matt.2024.09.005

“Alginate-modified ZnO anti-planktonic and anti-biofilm nanoparticles for infected wound healing ” International Journal of Biological Macromolecules, 280, 1 (2024) Yao, H*, Fan, Y*, Turalı-Emre, ES, Li, N, Ge, M, Wang, J, Wei, J 10.1016/j.ijbiomac.2024.135739

“Graph-theoretical chirality measure and chirality–property relations for chemical structures with multiscale mirror asymmetries” Chirality 36, 6, e23678 (2024) Cha, M*, Ma, J*, Kim, JY, Turalı-Emre, ES, Kotov, NA 10.1002/chir.23678

“Direct–Write Printing of Plasmonic Nanohelicoids by Circularly Polarized Light” PNAS, 121,11 (2024). Kim, JY, Mcglothin, C, Cha, M, Pfaffenberger, ZJ, Turalı-Emre, ES, Choi, W, Kim, S, Biteen, J, Kotov, NA, 10.1073/pnas.2312082121

“Tapered chiral nanoparticles as broad-spectrum thermally stable antivirals for SARS-CoV-2 variants” PNAS, 121, 13 (2024). Gao, R*, Xu, X*, Kumar, P*, Liu, Y, Zhang, H, Guo, X, Sun, M, Colombari, F, De Moura, A, Hao, C, Cha, M, Turali-Emre, ES, Ma, J, Xu, L, Kuang, H, Kotov, NA, Xu, C 10.1073/pnas.2310469121

“Self-Assembly of Iron Sulfide Nanoparticles into Compartmentalized Supraparticles as Artificial Viruses for Gene and Gene Therapies” Advanced Materials 35, 23 (2023). Turalı-Emre, ES, Emre, AE, Vecchio, DA, Kadiyala, U, Vanepps, SJ, Kotov, NA 10.1002/adma.202211244

“Unifying structural descriptors for Biological and Bioinspired Nanoscale Complexes” Nature Computational Science 2, 243–252 (2022). Cha, M*, Turalı-Emre, ES*, Xiao, X, Kim, JY, Bogdan, P, VanEpps, SJ, Violi, A, Kotov, NA 10.1038/s43588-022-00229-w

“Struct2Graph: A Graph Attention network for structure-based predictions of protein-protein interactions” BMC Bioinformatics 23, 370 (2022). Baranwal, M, Magner, A, Saldinger, J, Turalı-Emre, ES, Elvati, P, Kozaker, S, Vanepss, SJ, Kotov, NA, Violo, A, Hero, AO 10.1186/s12859-022-04910-9 Contribution: Database building and data curation, validation and writing

“Unexpected insights into the antibacterial activity of zinc oxide nanoparticles against methicillin-resistant Staphylococcus aureus (MRSA)” Nanoscale (2018); Kadiyala, U, Turalı-Emre, ES, Bahng, JH, Kotov, NA, VanEpps, SJ 10.1039/C7NR08499D

“Prediction and control of number of cells in microdroplets by stochastic modeling” Lab on a Chip, 12, (2012). Ceyhan, E, Xu, F, Gürkan, UA, Emre, AE, Turalı, ES, El Assal, R, Acıkgenc, A, Wu, Cm, Demirci, U. 10.1039/C2LC40523G

“A droplet-based building block approach for bladder smooth muscle cell (SMC) proliferation” Biofabrication 2010; 2:1 Xu, F, Moon, Sj, Emre, Ae, Turalı, ES, Song, Ys, Hacking, A, Nagatomi, J, Demirci, U 10.1088/1758-5082/2/1/014105

“Cell bioprinting as a potential novel high-throughput method for fabricating cell-based biosensors (CBBs)” IEEE Sensors 1,3 (2009) Xu, F, Moon, SJ, Emre, AE, Lien, C, Turalı, ES, Demirci, U 10.1109/ICSENS.2009.53982